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A mosaic monoploid reference sequence for the highly complex genome of sugarcane

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Garsmeur O., Droc G., Antonise R., Grimwood J., Potier B., Aitken K.S., Jenkins J., Martin G., Charron C., Hervouet C., Costet L., Yahiaoui N., Healey A., Sims D., Cherukuri Y., Sreedasyam A., Kilian A., Chan A.P., Van Sluys M.A., Swaminathan K., Town C., Berges H., Simmons B., Glaszmann J.C., Van der Vossen E., Henry R., Schmutz J., D'Hont A.
2018

Sugarcane (Saccharum spp.) is a major crop for sugar and bioenergy production. Its highly polyploid, aneuploid, heterozygous, and interspecific genome poses major challenges for producing a reference sequence. We exploited colinearity with sorghum to produce a BAC-based monoploid genome sequence of sugarcane. A minimum tiling path of 4660 sugarcane BAC that best covers the gene-rich part of the ...

Génétique et amélioration des plantes

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